Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | BK654_17195 | Not Available | Positive | 3946331 - 3947356 | 37196.9 |
| clpv1 family t6ss atpase | BK654_17200 | Not Available | Positive | 3947358 - 3949901 | 92307.0 |
| hypothetical protein | BK654_17205 | Not Available | Positive | 3949927 - 3950400 | 18084.5 |
| type iv secretion protein rhs | BK654_17210 | Not Available | Positive | 3950413 - 3952422 | 72666.9 |
| hypothetical protein | BK654_17215 | Not Available | Positive | 3952436 - 3952978 | 20215.5 |
| hypothetical protein | BK654_17220 | Not Available | Negative | 3953117 - 3953512 | 13187.6 |
| phosphotransferase family protein | BK654_17225 | Not Available | Positive | 3953710 - 3954777 | 40857.8 |
| short-chain dehydrogenase | BK654_17230 | Not Available | Positive | 3954802 - 3955569 | 26665.3 |
| 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase | BK654_17235 | Not Available | Positive | 3955801 - 3956916 | 40423.0 |
| pyridine nucleotide-disulfide oxidoreductase | BK654_17245 | Not Available | Negative | 3960031 - 3961467 | 52170.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
