Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine acetyltransferase | BK654_17095 | Not Available | Positive | 3922885 - 3923373 | 18039.4 |
| pp_03389 | BK654_17100 | Not Available | Negative | 3923497 - 3924102 | Not Available |
| universal stress protein uspa | BK654_17105 | Not Available | Positive | 3924282 - 3925145 | 31413.9 |
| duf1289 domain-containing protein | BK654_17110 | Not Available | Negative | 3925266 - 3925739 | 18416.4 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | BK654_17115 | Not Available | Positive | 3926148 - 3928757 | 94004.1 |
| haaap family serine/threonine permease | BK654_17120 | Not Available | Negative | 3929017 - 3930297 | 46215.7 |
| hypothetical protein | BK654_17125 | Not Available | Negative | 3930508 - 3931008 | 18454.8 |
| hypothetical protein | BK654_17130 | Not Available | Positive | 3931432 - 3932325 | 31702.6 |
| hydroxyacid dehydrogenase | BK654_17135 | Not Available | Positive | 3932639 - 3933592 | 33552.6 |
| type vi secretion protein | BK654_17140 | Not Available | Negative | 3933589 - 3934671 | 40723.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
