Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptigoglycan-binding protein lysm | BK654_16990 | Not Available | Positive | 3883450 - 3884298 | 29872.7 |
| rna polymerase sigma factor rpos | BK654_16995 | Not Available | Positive | 3884405 - 3885412 | 38192.6 |
| ferredoxin | BK654_17000 | Not Available | Negative | 3885902 - 3886225 | 11933.1 |
| dna mismatch repair protein muts | BK654_17005 | Not Available | Negative | 3886368 - 3888947 | 95301.7 |
| hypothetical protein | BK654_17015 | Not Available | Positive | 3893905 - 3895170 | 45705.9 |
| hypothetical protein | BK654_17020 | Not Available | Positive | 3895276 - 3902577 | 270797.0 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | BK654_17025 | Not Available | Positive | 3902664 - 3903824 | 41794.1 |
| helix-turn-helix transcriptional regulator | BK654_17030 | Not Available | Positive | 3904401 - 3905228 | 30675.8 |
| multidrug transporter | BK654_17035 | Not Available | Positive | 3905316 - 3906740 | 51498.7 |
| hypothetical protein | BK654_17040 | Not Available | Positive | 3906747 - 3906953 | 7377.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
