Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | BK654_16840 | Not Available | Positive | 3850779 - 3851516 | 27061.8 |
| translation elongation factor ts | BK654_16845 | Not Available | Positive | 3851708 - 3852571 | 30395.7 |
| ump kinase | BK654_16850 | Not Available | Positive | 3852785 - 3853528 | 26606.5 |
| ribosome recycling factor | BK654_16855 | Not Available | Positive | 3853525 - 3854082 | 20561.7 |
| di-trans,poly-cis-decaprenylcistransferase | BK654_16860 | Not Available | Positive | 3854096 - 3854851 | 28060.6 |
| phosphatidate cytidylyltransferase | BK654_16865 | Not Available | Positive | 3854851 - 3855657 | 28843.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | BK654_16870 | Not Available | Positive | 3855654 - 3856844 | 42582.5 |
| rip metalloprotease rsep | BK654_16875 | Not Available | Positive | 3856897 - 3858249 | 48160.1 |
| outer membrane protein assembly factor bama | BK654_16880 | Not Available | Positive | 3858324 - 3860699 | 87195.3 |
| hypothetical protein | BK654_16885 | Not Available | Positive | 3860745 - 3861248 | 18757.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
