Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine sulfinate desulfinase | BK654_16790 | Not Available | Negative | 3837867 - 3839072 | 43330.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | BK654_16795 | Not Available | Negative | 3839198 - 3840232 | 36103.4 |
| arsenate reductase | BK654_16800 | Not Available | Negative | 3840265 - 3840627 | 13906.7 |
| na+/h+ antiporter | BK654_16805 | Not Available | Positive | 3840839 - 3842485 | 60070.0 |
| short chain dehydrogenase | BK654_16810 | Not Available | Negative | 3842698 - 3843306 | 21122.3 |
| lysr family transcriptional regulator | BK654_16815 | Not Available | Positive | 3843414 - 3844307 | 32966.9 |
| hypothetical protein | BK654_16820 | Not Available | Positive | 3844803 - 3845162 | 12857.1 |
| succinyldiaminopimelate transaminase | BK654_16825 | Not Available | Negative | 3845467 - 3846666 | 44240.9 |
| [protein-pii] uridylyltransferase | BK654_16830 | Not Available | Negative | 3846802 - 3849504 | 103321.0 |
| type i methionyl aminopeptidase | BK654_16835 | Not Available | Negative | 3849549 - 3850331 | 28855.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
