Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_16540 | Not Available | Positive | 3786468 - 3786707 | 9375.57 |
| hypothetical protein | BK654_16545 | Not Available | Positive | 3786762 - 3786947 | 7273.03 |
| plasmid stabilization protein pare | BK654_16550 | Not Available | Negative | 3786995 - 3787294 | 11305.6 |
| transcriptional regulator | BK654_16555 | Not Available | Negative | 3787257 - 3787520 | 9693.33 |
| gamma-aminobutyraldehyde dehydrogenase | BK654_16560 | Not Available | Negative | 3787664 - 3789088 | 50864.8 |
| spermidine/putrescine abc transporter permease | BK654_16565 | Not Available | Negative | 3789256 - 3790074 | 29505.8 |
| spermidine/putrescine abc transporter permease | BK654_16570 | Not Available | Negative | 3790064 - 3791011 | 34443.2 |
| polyamine abc transporter atp-binding protein | BK654_16575 | Not Available | Negative | 3791013 - 3792050 | 38297.9 |
| spermidine/putrescine abc transporter substrate-binding protein | BK654_16580 | Not Available | Negative | 3792299 - 3793450 | 42158.0 |
| gamma-aminobutyraldehyde dehydrogenase | BK654_16585 | Not Available | Negative | 3793539 - 3794996 | 52032.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
