Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-disulfide isomerase | BK654_16490 | Not Available | Positive | 3773332 - 3774063 | 26054.6 |
| homoserine dehydrogenase | BK654_16495 | Not Available | Positive | 3774201 - 3775505 | 46308.0 |
| threonine synthase | BK654_16500 | Not Available | Positive | 3775610 - 3777019 | 51805.1 |
| histidine kinase | BK654_16505 | Not Available | Positive | 3777140 - 3778510 | 51761.8 |
| hypothetical protein | BK654_16510 | Not Available | Positive | 3778697 - 3778984 | 10364.8 |
| formyl-coa transferase | BK654_16515 | Not Available | Negative | 3779336 - 3780535 | 43293.5 |
| hypothetical protein | BK654_16520 | Not Available | Positive | 3780683 - 3781225 | 20793.7 |
| single-stranded-dna-specific exonuclease recj | BK654_16525 | Not Available | Positive | 3781396 - 3783105 | 62159.4 |
| oxidoreductase | BK654_16530 | Not Available | Positive | 3783482 - 3784588 | 40519.9 |
| glucan biosynthesis protein d | BK654_16535 | Not Available | Negative | 3784774 - 3786399 | 60996.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
