Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase la | BK654_16440 | Not Available | Negative | 3761926 - 3764340 | 89161.5 |
| mfs transporter | BK654_16445 | Not Available | Negative | 3764491 - 3765804 | 46211.0 |
| transporter | BK654_16450 | Not Available | Negative | 3766217 - 3767458 | 46087.0 |
| inner membrane protein ypjd | BK654_16455 | Not Available | Negative | 3767471 - 3768283 | 29478.2 |
| signal recognition particle protein | BK654_16460 | Not Available | Positive | 3768490 - 3769866 | 49393.9 |
| 30s ribosomal protein s16 | BK654_16465 | Not Available | Positive | 3770118 - 3770369 | 9222.04 |
| ribosome maturation factor rimm | BK654_16470 | Not Available | Positive | 3770375 - 3770911 | 20106.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | BK654_16475 | Not Available | Positive | 3770914 - 3771666 | 28067.2 |
| 50s ribosomal protein l19 | BK654_16480 | Not Available | Positive | 3771712 - 3772062 | 12969.9 |
| site-specific tyrosine recombinase xerd | BK654_16485 | Not Available | Positive | 3772194 - 3773090 | 33927.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
