Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | BK654_16340 | Not Available | Positive | 3740427 - 3741899 | 54799.9 |
| aminotransferase | BK654_16345 | Not Available | Positive | 3742136 - 3743284 | 42270.5 |
| nitrilase family protein | BK654_16350 | Not Available | Positive | 3743272 - 3744063 | 29611.1 |
| hypothetical protein | BK654_16355 | Not Available | Positive | 3744131 - 3744547 | 14591.3 |
| 2-isopropylmalate synthase | BK654_16360 | Not Available | Negative | 3744734 - 3746413 | 61839.2 |
| peptidase m23 | BK654_16365 | Not Available | Negative | 3746851 - 3747672 | 29377.6 |
| exodeoxyribonuclease vii large subunit | BK654_16370 | Not Available | Negative | 3747676 - 3749055 | 51077.1 |
| permease | BK654_16375 | Not Available | Positive | 3749285 - 3750052 | 27595.4 |
| sugar abc transporter atpase | BK654_16380 | Not Available | Positive | 3750120 - 3750668 | 20480.5 |
| imp dehydrogenase | BK654_16385 | Not Available | Positive | 3750962 - 3752431 | 52023.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
