Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin, 2fe-2s type, isc system | BK654_16290 | Not Available | Positive | 3731958 - 3732299 | 12477.7 |
| fe-s assembly protein iscx | BK654_16295 | Not Available | Positive | 3732314 - 3732514 | 7536.94 |
| nucleoside-diphosphate kinase | BK654_16300 | Not Available | Positive | 3732607 - 3733032 | 15100.9 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase | BK654_16305 | Not Available | Positive | 3733061 - 3734209 | 42186.8 |
| type iv pilus biogenesis/stability protein pilw | BK654_16310 | Not Available | Positive | 3734222 - 3734980 | 28831.3 |
| cro/cl family transcriptional regulator | BK654_16315 | Not Available | Positive | 3734980 - 3735972 | 34305.4 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BK654_16320 | Not Available | Positive | 3735976 - 3737085 | 39760.1 |
| histidine--trna ligase | BK654_16325 | Not Available | Positive | 3737110 - 3738399 | 47916.5 |
| gtp-binding protein | BK654_16330 | Not Available | Positive | 3738440 - 3739081 | 22770.9 |
| outer membrane protein assembly factor bamb | BK654_16335 | Not Available | Positive | 3739074 - 3740225 | 40772.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
