Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK654_16185 | Not Available | Negative | 3713350 - 3714252 | 33507.3 |
| short-chain dehydrogenase | BK654_16190 | Not Available | Positive | 3714391 - 3715137 | 26479.6 |
| hypothetical protein | BK654_16200 | Not Available | Negative | 3715514 - 3715999 | 18315.2 |
| hypothetical protein | BK654_16205 | Not Available | Negative | 3716608 - 3716937 | 12224.8 |
| Trna-leu | Not Available | Not Available | Positive | 3717163 - 3717247 | Not Available |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | BK654_16215 | Not Available | Positive | 3717356 - 3718405 | 38294.9 |
| trna guanosine(34) transglycosylase tgt | BK654_16220 | Not Available | Positive | 3718402 - 3719535 | 41803.8 |
| preprotein translocase subunit yajc | BK654_16225 | Not Available | Positive | 3719579 - 3719917 | 11924.7 |
| protein-export membrane protein secd | BK654_16230 | Not Available | Positive | 3719983 - 3721851 | 67233.4 |
| protein-export membrane protein secf | BK654_16235 | Not Available | Positive | 3721861 - 3722775 | 32933.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
