Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | BK654_15985 | Not Available | Negative | 3667479 - 3670148 | 99513.2 |
| marr family transcriptional regulator | BK654_15990 | Not Available | Positive | 3670322 - 3670774 | 16905.9 |
| pyruvate dehydrogenase | BK654_15995 | Not Available | Negative | 3670785 - 3671885 | 39641.4 |
| hypothetical protein | BK654_16000 | Not Available | Negative | 3672021 - 3673070 | 39474.4 |
| cytoplasmic protein | BK654_16005 | Not Available | Positive | 3673187 - 3673558 | 13871.7 |
| voc family virulence protein | BK654_16010 | Not Available | Negative | 3673584 - 3674000 | 15097.3 |
| hypothetical protein | BK654_16015 | Not Available | Negative | 3674390 - 3675151 | 28255.7 |
| hypothetical protein | BK654_16020 | Not Available | Negative | 3675145 - 3676290 | 43674.0 |
| hypothetical protein | BK654_16025 | Not Available | Negative | 3676454 - 3677065 | 22635.3 |
| hypothetical protein | BK654_16030 | Not Available | Positive | 3677205 - 3677750 | 20098.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
