Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_15885 | Not Available | Negative | 3646897 - 3647640 | 27875.1 |
| diguanylate cyclase | BK654_15890 | Not Available | Negative | 3647733 - 3648746 | 39015.1 |
| lysr family transcriptional regulator | BK654_15895 | Not Available | Negative | 3648876 - 3649793 | 33956.1 |
| aspartate aminotransferase family protein | BK654_15900 | Not Available | Positive | 3649892 - 3651067 | 42329.5 |
| mfs transporter | BK654_15905 | Not Available | Negative | 3651033 - 3652274 | 42941.2 |
| transcriptional regulator | BK654_15910 | Not Available | Positive | 3652379 - 3652831 | 16761.0 |
| cell envelope biogenesis protein ompa | BK654_15915 | Not Available | Positive | 3652971 - 3653708 | 25664.9 |
| hypothetical protein | BK654_15920 | Not Available | Negative | 3653817 - 3655724 | 71663.0 |
| c4-dicarboxylate abc transporter | BK654_15925 | Not Available | Negative | 3655985 - 3656980 | 37393.1 |
| hypothetical protein | BK654_15930 | Not Available | Positive | 3657158 - 3657670 | 19518.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
