Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetase | BK654_15735 | Not Available | Positive | 3616659 - 3617963 | 47265.4 |
| maleylacetoacetate isomerase | BK654_15740 | Not Available | Positive | 3617974 - 3618612 | 23309.0 |
| hypothetical protein | BK654_15745 | Not Available | Negative | 3618754 - 3619557 | 30120.6 |
| amino acid dehydrogenase | BK654_15750 | Not Available | Positive | 3619744 - 3620763 | 35501.7 |
| benzoate transporter | BK654_15755 | Not Available | Negative | 3620833 - 3622038 | 41921.1 |
| gntr family transcriptional regulator | BK654_15760 | Not Available | Positive | 3622382 - 3623770 | 50883.3 |
| hypothetical protein | BK654_15765 | Not Available | Negative | 3623848 - 3624108 | 9756.59 |
| phosphate-starvation-inducible protein psie | BK654_15770 | Not Available | Positive | 3624367 - 3624867 | 18543.9 |
| hypothetical protein | BK654_15775 | Not Available | Negative | 3624864 - 3625181 | 11234.7 |
| ribosomal subunit interface protein | BK654_15780 | Not Available | Positive | 3625686 - 3626096 | 15286.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
