Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | BK654_15685 | Not Available | Positive | 3601330 - 3602232 | 34282.8 |
| serine/threonine protein kinase | BK654_15690 | Not Available | Positive | 3602498 - 3603409 | 32708.8 |
| n-acetylmuramoyl-l-alanine amidase | BK654_15695 | Not Available | Negative | 3603452 - 3604219 | 28244.2 |
| hypothetical protein | BK654_15700 | Not Available | Negative | 3604581 - 3605363 | 29618.0 |
| hypothetical protein | BK654_15705 | Not Available | Negative | 3605730 - 3607817 | 74400.5 |
| adhesin | BK654_15710 | Not Available | Positive | 3608438 - 3610231 | 64159.8 |
| outer membrane lipoprotein-sorting protein | BK654_15715 | Not Available | Positive | 3610254 - 3611621 | 50855.1 |
| helix-turn-helix transcriptional regulator | BK654_15720 | Not Available | Positive | 3611782 - 3614334 | 95739.7 |
| iclr family transcriptional regulator | BK654_15725 | Not Available | Negative | 3614366 - 3615187 | 29189.9 |
| homogentisate 1,2-dioxygenase | BK654_15730 | Not Available | Positive | 3615351 - 3616655 | 48050.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
