Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hopj type iii effector protein | BK654_15635 | Not Available | Negative | 3595011 - 3595349 | 11971.1 |
| cell division protein dedd | BK654_15640 | Not Available | Negative | 3595342 - 3595638 | 11197.1 |
| dihydroneopterin triphosphate 2'-epimerase | BK654_15645 | Not Available | Negative | 3595737 - 3596117 | 14199.2 |
| gtp cyclohydrolase i fole | BK654_15650 | Not Available | Negative | 3596118 - 3596678 | 20796.4 |
| dihydromonapterin reductase | BK654_15655 | Not Available | Negative | 3596699 - 3597409 | 25290.5 |
| helix-turn-helix-type transcriptional regulator | BK654_15660 | Not Available | Positive | 3597653 - 3598612 | 35863.8 |
| hypothetical protein | BK654_15665 | Not Available | Negative | 3598632 - 3599237 | 23583.1 |
| hypothetical protein | BK654_15670 | Not Available | Negative | 3599292 - 3599768 | 17785.0 |
| flavodoxin | BK654_15675 | Not Available | Positive | 3599931 - 3600383 | 16045.1 |
| class ii aldolase | BK654_15680 | Not Available | Positive | 3600548 - 3601330 | 27960.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
