Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| faga protein | BK654_15435 | Not Available | Positive | 3556301 - 3556696 | 15338.4 |
| aspartate ammonia-lyase | BK654_15440 | Not Available | Positive | 3556689 - 3558065 | 48799.0 |
| hypothetical protein | BK654_15445 | Not Available | Positive | 3558092 - 3558532 | 16790.0 |
| superoxide dismutase | BK654_15450 | Not Available | Positive | 3558535 - 3559146 | 22464.5 |
| zip family metal transporter | BK654_15455 | Not Available | Positive | 3559177 - 3560067 | 30285.3 |
| phosphocarrier protein hpr | BK654_15460 | Not Available | Negative | 3560193 - 3560468 | 9908.03 |
| rnase adaptor protein rapz | BK654_15465 | Not Available | Negative | 3560484 - 3561341 | 32186.5 |
| pts iia-like nitrogen-regulatory protein ptsn | BK654_15470 | Not Available | Negative | 3561344 - 3561808 | 16752.4 |
| ribosomal subunit interface protein | BK654_15475 | Not Available | Negative | 3561821 - 3562129 | 11589.0 |
| rna polymerase factor sigma-54 | BK654_15480 | Not Available | Negative | 3562206 - 3563699 | 56533.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
