Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | BK654_15335 | Not Available | Positive | 3531454 - 3532899 | 51128.9 |
| mfs transporter | BK654_15340 | Not Available | Positive | 3532985 - 3534349 | 49397.1 |
| galactarate dehydratase | BK654_15345 | Not Available | Positive | 3534363 - 3535916 | 56500.4 |
| malate transporter | BK654_15350 | Not Available | Positive | 3536174 - 3537115 | 33867.2 |
| 4-carboxymuconolactone decarboxylase | BK654_15355 | Not Available | Negative | 3537243 - 3537623 | 13852.6 |
| conjugal transfer protein trar | BK654_15360 | Not Available | Negative | 3537620 - 3538681 | 37413.4 |
| hypothetical protein | BK654_15365 | Not Available | Negative | 3538731 - 3539108 | 13564.1 |
| aspartyl/glutamyl-trna amidotransferase subunit b | BK654_15370 | Not Available | Negative | 3539258 - 3540703 | 52937.3 |
| aspartyl/glutamyl-trna amidotransferase subunit a | BK654_15375 | Not Available | Negative | 3540714 - 3542165 | 51559.5 |
| asparaginyl/glutamyl-trna amidotransferase subunit c | BK654_15380 | Not Available | Negative | 3542182 - 3542469 | 10283.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
