Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | BK654_15285 | Not Available | Negative | 3520432 - 3522420 | 73860.4 |
| hypothetical protein | BK654_15290 | Not Available | Positive | 3523019 - 3523411 | 14142.5 |
| hypothetical protein | BK654_15295 | Not Available | Positive | 3523705 - 3523950 | 9165.77 |
| hypothetical protein | BK654_15300 | Not Available | Negative | 3523999 - 3524715 | 25689.8 |
| histidine kinase | BK654_15305 | Not Available | Positive | 3524943 - 3526205 | 46692.8 |
| two-component system response regulator | BK654_15310 | Not Available | Positive | 3526198 - 3526758 | 20528.7 |
| abc transporter atp-binding protein | BK654_15315 | Not Available | Positive | 3526855 - 3528582 | 65684.8 |
| gntr family transcriptional regulator | BK654_15320 | Not Available | Positive | 3528860 - 3529606 | 27459.6 |
| hypothetical protein | BK654_15325 | Not Available | Negative | 3529686 - 3530042 | 12576.0 |
| 5-dehydro-4-deoxyglucarate dehydratase | BK654_15330 | Not Available | Positive | 3530413 - 3531324 | 32743.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
