Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | BK654_15135 | Not Available | Negative | 3486333 - 3486713 | 14024.8 |
| pantoate--beta-alanine ligase | BK654_15140 | Not Available | Negative | 3486744 - 3487604 | 31119.7 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | BK654_15145 | Not Available | Negative | 3487601 - 3488401 | 28008.4 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BK654_15150 | Not Available | Negative | 3488755 - 3489240 | 17771.5 |
| poly(a) polymerase | BK654_15155 | Not Available | Negative | 3489244 - 3490641 | 53313.7 |
| response regulator | BK654_15160 | Not Available | Negative | 3491430 - 3492860 | 52199.3 |
| atpase | BK654_15165 | Not Available | Negative | 3492883 - 3495831 | 107913.0 |
| trna glutamyl-q(34) synthetase gluqrs | BK654_15170 | Not Available | Negative | 3496076 - 3496966 | 33196.7 |
| rna polymerase-binding protein dksa | BK654_15175 | Not Available | Negative | 3497195 - 3497638 | 16964.2 |
| aminotransferase | BK654_15180 | Not Available | Positive | 3497989 - 3499161 | 42687.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
