Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase | BK654_15085 | Not Available | Negative | 3472238 - 3473107 | 31860.9 |
| type ii secretion system protein f | BK654_15090 | Not Available | Negative | 3473109 - 3474326 | 44219.4 |
| type iv-a pilus assembly atpase pilb | BK654_15095 | Not Available | Negative | 3474329 - 3476029 | 62717.6 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | BK654_15100 | Not Available | Positive | 3476255 - 3476674 | 14029.0 |
| phospholipid-binding protein | BK654_15105 | Not Available | Positive | 3476953 - 3477306 | 11987.5 |
| hypothetical protein | BK654_15110 | Not Available | Negative | 3477655 - 3477951 | 10954.1 |
| hypothetical protein | BK654_15115 | Not Available | Negative | 3477953 - 3480886 | 107061.0 |
| sam-dependent methyltransferase | BK654_15120 | Not Available | Negative | 3481006 - 3482022 | 37659.9 |
| acetate--coa ligase | BK654_15125 | Not Available | Negative | 3482181 - 3484118 | 71987.6 |
| glucose-6-phosphate isomerase | BK654_15130 | Not Available | Negative | 3484319 - 3485983 | 61454.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
