Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_14985 | Not Available | Positive | 3455442 - 3455807 | 13083.5 |
| sigma-54-dependent fis family transcriptional regulator | BK654_14990 | Not Available | Negative | 3456042 - 3457388 | 50153.6 |
| pas domain-containing sensor histidine kinase | BK654_14995 | Not Available | Negative | 3457385 - 3458974 | 58899.1 |
| outer membrane protein assembly factor bamd | BK654_15000 | Not Available | Negative | 3459368 - 3460384 | 38301.6 |
| rna pseudouridine synthase | BK654_15005 | Not Available | Positive | 3460536 - 3461498 | 35434.9 |
| multi-copper polyphenol oxidoreductase | BK654_15010 | Not Available | Positive | 3461495 - 3462220 | 25542.5 |
| atp-dependent chaperone clpb | BK654_15015 | Not Available | Positive | 3462350 - 3464914 | 95446.8 |
| Trna-asn | Not Available | Not Available | Positive | 3465203 - 3465278 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 3465286 - 3465362 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3465368 - 3465443 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
