Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | BK654_14935 | Not Available | Positive | 3445346 - 3445783 | 15798.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | BK654_14940 | Not Available | Positive | 3445957 - 3446904 | 34562.0 |
| general secretion pathway protein gsph | BK654_14945 | Not Available | Negative | 3446881 - 3447396 | 18727.7 |
| general secretion pathway protein gsph | BK654_14950 | Not Available | Positive | 3447532 - 3448005 | 16362.0 |
| type iv pilus modification protein pilv | BK654_14955 | Not Available | Positive | 3448002 - 3448463 | 16338.5 |
| pilus assembly protein pilw | BK654_14960 | Not Available | Positive | 3448460 - 3449173 | 25124.4 |
| pilus assembly protein pilx | BK654_14965 | Not Available | Positive | 3449182 - 3449664 | 16783.3 |
| pilus assembly protein | BK654_14970 | Not Available | Positive | 3449651 - 3452764 | 109880.0 |
| pilus assembly protein | BK654_14975 | Not Available | Positive | 3452775 - 3453179 | 14801.8 |
| glycine oxidase thio | BK654_14980 | Not Available | Positive | 3453237 - 3454343 | 39443.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
