Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | BK654_14735 | Not Available | Positive | 3400976 - 3401983 | 37259.5 |
| duf2474 domain-containing protein | BK654_14740 | Not Available | Positive | 3402005 - 3402169 | 6098.66 |
| 50s rrna methyltransferase | BK654_14745 | Not Available | Negative | 3402241 - 3403365 | 40497.0 |
| zinc protease | BK654_14750 | Not Available | Negative | 3403547 - 3404260 | 27100.2 |
| ferredoxin--nadp(+) reductase | BK654_14755 | Not Available | Positive | 3404554 - 3405330 | 29720.6 |
| large-conductance mechanosensitive channel | BK654_14760 | Not Available | Negative | 3405371 - 3405784 | 14442.0 |
| catalase | BK654_14765 | Not Available | Positive | 3406067 - 3407608 | 56770.5 |
| hypothetical protein | BK654_14770 | Not Available | Positive | 3407676 - 3408224 | 19579.4 |
| dna repair protein rada | BK654_14775 | Not Available | Positive | 3408269 - 3409636 | 48775.3 |
| pilz domain-containing protein | BK654_14780 | Not Available | Negative | 3409646 - 3410002 | 13758.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
