Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neutral zinc metallopeptidase | BK654_14635 | Not Available | Negative | 3379252 - 3380136 | 31770.5 |
| eama family transporter | BK654_14640 | Not Available | Positive | 3380388 - 3381266 | 31823.2 |
| di-trans,poly-cis-decaprenylcistransferase | BK654_14645 | Not Available | Positive | 3381628 - 3382371 | 27516.8 |
| hypothetical protein | BK654_14650 | Not Available | Positive | 3382398 - 3383432 | 38994.6 |
| hypothetical protein | BK654_14655 | Not Available | Negative | 3383581 - 3384918 | 48892.8 |
| 4-hydroxyphenylpyruvate dioxygenase | BK654_14660 | Not Available | Positive | 3385189 - 3387090 | 69906.0 |
| tetr family transcriptional regulator | BK654_14665 | Not Available | Positive | 3387194 - 3387871 | 25897.1 |
| shikimate dehydrogenase | BK654_14670 | Not Available | Negative | 3387996 - 3388853 | 30328.9 |
| type ii 3-dehydroquinate dehydratase | BK654_14675 | Not Available | Negative | 3388853 - 3389293 | 15863.0 |
| trna (uridine(54)-c5)-methyltransferase trma | BK654_14680 | Not Available | Negative | 3389610 - 3390689 | 40714.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
