Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | BK654_14585 | Not Available | Positive | 3369737 - 3370348 | 22459.3 |
| asnc family transcriptional regulator | BK654_14590 | Not Available | Negative | 3370476 - 3370928 | 16402.2 |
| drug/metabolite exporter yeda | BK654_14595 | Not Available | Positive | 3371090 - 3371992 | 31509.5 |
| dead/deah box helicase | BK654_14600 | Not Available | Positive | 3372051 - 3373388 | 48752.5 |
| nad(fad)-utilizing dehydrogenase | BK654_14605 | Not Available | Negative | 3373513 - 3374754 | 43799.3 |
| histone deacetylase | BK654_14610 | Not Available | Negative | 3375033 - 3375953 | 34021.5 |
| gnat family n-acetyltransferase | BK654_14615 | Not Available | Positive | 3376027 - 3376596 | 21373.5 |
| acyl-coa thioesterase ii | BK654_14620 | Not Available | Positive | 3376701 - 3377570 | 32518.5 |
| had family hydrolase | BK654_14625 | Not Available | Positive | 3377567 - 3378160 | 21457.8 |
| hypothetical protein | BK654_14630 | Not Available | Negative | 3378304 - 3379251 | 34653.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
