Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde-2,1-aminomutase | BK654_14485 | Not Available | Negative | 3336917 - 3338200 | 45137.4 |
| thiamine-phosphate diphosphorylase | BK654_14490 | Not Available | Negative | 3338228 - 3338854 | 22215.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | BK654_14495 | Not Available | Negative | 3338872 - 3339669 | 28403.2 |
| hybrid sensor histidine kinase/response regulator | BK654_14500 | Not Available | Positive | 3340130 - 3342514 | 87452.3 |
| dna alkylation response protein | BK654_14505 | Not Available | Positive | 3342587 - 3344236 | 59808.5 |
| amp nucleosidase | BK654_14510 | Not Available | Positive | 3344486 - 3345949 | 54573.4 |
| pseudouridine synthase | BK654_14515 | Not Available | Positive | 3346019 - 3346654 | 23839.8 |
| hypothetical protein | BK654_14520 | Not Available | Negative | 3346649 - 3346858 | 7499.6 |
| asnc family transcriptional regulator | BK654_14525 | Not Available | Negative | 3347871 - 3348350 | 18068.9 |
| hypothetical protein | BK654_14530 | Not Available | Negative | 3348688 - 3349470 | 29676.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
