Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_14385 | Not Available | Positive | 3315760 - 3316770 | 36200.1 |
| serine-type d-ala-d-ala carboxypeptidase | BK654_14390 | Not Available | Positive | 3316939 - 3318096 | 42132.9 |
| hypothetical protein | BK654_14395 | Not Available | Positive | 3318178 - 3318453 | 10201.3 |
| octanoyltransferase | BK654_14400 | Not Available | Positive | 3318453 - 3319100 | 23441.3 |
| lipoyl synthase | BK654_14405 | Not Available | Positive | 3319102 - 3320124 | 38159.4 |
| ld-carboxypeptidase | BK654_14410 | Not Available | Positive | 3321143 - 3322075 | 33640.0 |
| murein transglycosylase | BK654_14415 | Not Available | Negative | 3322205 - 3323527 | 47892.9 |
| lipoyl synthase | BK654_14420 | Not Available | Negative | 3323600 - 3323764 | 6122.25 |
| dna polymerase iii subunit delta | BK654_14425 | Not Available | Negative | 3324039 - 3325076 | 37348.2 |
| hypothetical protein | BK654_14430 | Not Available | Negative | 3325116 - 3325721 | 22299.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
