Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease | BK654_14335 | Not Available | Positive | 3305459 - 3306049 | 21568.9 |
| phosphoesterase | BK654_14340 | Not Available | Negative | 3306213 - 3307529 | 47311.3 |
| 3-methyladenine dna glycosylase | BK654_14345 | Not Available | Negative | 3307828 - 3308505 | 25092.1 |
| glutamate-5-semialdehyde dehydrogenase | BK654_14350 | Not Available | Positive | 3308692 - 3309963 | 45124.3 |
| nicotinic acid mononucleotide adenylyltransferase | BK654_14355 | Not Available | Positive | 3309965 - 3310648 | 24620.6 |
| ribosome silencing factor | BK654_14360 | Not Available | Positive | 3310720 - 3311214 | 18040.4 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | BK654_14365 | Not Available | Positive | 3311224 - 3311691 | 17691.5 |
| penicillin-binding protein 2 | BK654_14370 | Not Available | Positive | 3311702 - 3313597 | 70494.6 |
| rod shape-determining protein roda | BK654_14375 | Not Available | Positive | 3313629 - 3314732 | 40121.8 |
| lytic murein transglycosylase b | BK654_14380 | Not Available | Positive | 3314750 - 3315760 | 37749.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
