Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | BK654_14285 | Not Available | Negative | 3294754 - 3296274 | 54859.9 |
| sigma-54-dependent fis family transcriptional regulator | BK654_14290 | Not Available | Positive | 3296564 - 3298471 | 70304.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | BK654_14295 | Not Available | Positive | 3298828 - 3300177 | 48324.0 |
| aromatic acid decarboxylase | BK654_14300 | Not Available | Positive | 3300174 - 3300806 | 22905.7 |
| hypothetical protein | BK654_14305 | Not Available | Positive | 3300799 - 3301083 | 9535.77 |
| nucleoside-diphosphate sugar epimerase | BK654_14310 | Not Available | Negative | 3301235 - 3301876 | 23358.5 |
| peptidase c13 | BK654_14315 | Not Available | Negative | 3301904 - 3303622 | 62387.8 |
| dehydratase | BK654_14320 | Not Available | Negative | 3303725 - 3304180 | 16734.5 |
| cida/lrga family protein | BK654_14325 | Not Available | Positive | 3304370 - 3304735 | 13017.8 |
| hypothetical protein | BK654_14330 | Not Available | Positive | 3304732 - 3305448 | 24958.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
