Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | BK654_14135 | Not Available | Positive | 3252362 - 3257146 | 179974.0 |
| hypothetical protein | BK654_14140 | Not Available | Positive | 3257143 - 3257448 | 12072.8 |
| cystathionine gamma-synthase | BK654_14145 | Not Available | Positive | 3257744 - 3259012 | 45540.4 |
| amino acid permease | BK654_14150 | Not Available | Positive | 3259167 - 3260597 | 51679.9 |
| lysr family transcriptional regulator | BK654_14155 | Not Available | Positive | 3260655 - 3261545 | 33184.1 |
| threonine synthase | BK654_14160 | Not Available | Positive | 3261562 - 3262941 | 50908.7 |
| asnc family transcriptional regulator | BK654_14165 | Not Available | Positive | 3262951 - 3263388 | 16170.6 |
| homoserine dehydrogenase | BK654_14170 | Not Available | Positive | 3263701 - 3264750 | 36531.4 |
| aldehyde dehydrogenase | BK654_14175 | Not Available | Positive | 3264755 - 3266167 | 49978.2 |
| glycoside hydrolase 68 family protein | BK654_14180 | Not Available | Positive | 3266645 - 3267919 | 47017.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
