Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | BK654_13935 | Not Available | Negative | 3211288 - 3212160 | 32105.4 |
| protein methyltransferase | BK654_13940 | Not Available | Negative | 3212341 - 3213000 | 24396.1 |
| hypothetical protein | BK654_13945 | Not Available | Negative | 3212997 - 3213461 | 16421.0 |
| transcriptional regulator nrdr | BK654_13950 | Not Available | Positive | 3213589 - 3214053 | 17839.6 |
| riboflavin biosynthesis protein ribd | BK654_13955 | Not Available | Positive | 3214050 - 3215183 | 40258.6 |
| riboflavin synthase subunit alpha | BK654_13960 | Not Available | Positive | 3215230 - 3215892 | 23268.0 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BK654_13965 | Not Available | Positive | 3215909 - 3217000 | 39466.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | BK654_13970 | Not Available | Positive | 3217091 - 3217567 | 16405.0 |
| n utilization substance protein b | BK654_13975 | Not Available | Positive | 3217564 - 3218064 | 18901.5 |
| thiamine-phosphate kinase | BK654_13980 | Not Available | Positive | 3218083 - 3219048 | 33004.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
