Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel protein | BK654_13885 | Not Available | Positive | 3197844 - 3199922 | 75895.5 |
| atp-dependent dna helicase | BK654_13890 | Not Available | Negative | 3200066 - 3204379 | 158246.0 |
| dtdp-4-dehydrorhamnose reductase | BK654_13895 | Not Available | Positive | 3204691 - 3205575 | 32541.9 |
| nad-dependent dehydratase | BK654_13900 | Not Available | Positive | 3205568 - 3206497 | 33211.4 |
| outer membrane protein ompw | BK654_13905 | Not Available | Negative | 3206634 - 3207332 | 24576.2 |
| hypothetical protein | BK654_13910 | Not Available | Negative | 3207577 - 3208095 | 18911.9 |
| peptide abc transporter permease | BK654_13915 | Not Available | Negative | 3208107 - 3209372 | 45976.3 |
| methionine abc transporter atp-binding protein | BK654_13920 | Not Available | Negative | 3209374 - 3210084 | 25746.8 |
| zinc-binding protein | BK654_13925 | Not Available | Negative | 3210219 - 3210800 | 20745.3 |
| hypothetical protein | BK654_13930 | Not Available | Positive | 3210931 - 3211284 | 12510.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
