Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s11 | BK654_13785 | Not Available | Positive | 3174672 - 3175061 | 13616.4 |
| 30s ribosomal protein s4 | BK654_13790 | Not Available | Positive | 3175080 - 3175700 | 23077.7 |
| dna-directed rna polymerase subunit alpha | BK654_13795 | Not Available | Positive | 3175723 - 3176724 | 36633.9 |
| 50s ribosomal protein l17 | BK654_13800 | Not Available | Positive | 3176767 - 3177153 | 14432.6 |
| catalase | BK654_13805 | Not Available | Positive | 3177377 - 3178825 | 53612.7 |
| bacterioferritin | BK654_13810 | Not Available | Positive | 3178983 - 3179447 | 18175.7 |
| excinuclease abc subunit a | BK654_13815 | Not Available | Negative | 3179610 - 3182444 | 104390.0 |
| mfs transporter | BK654_13820 | Not Available | Positive | 3182624 - 3184021 | 49463.9 |
| single-stranded dna-binding protein | BK654_13825 | Not Available | Positive | 3184031 - 3184555 | 19410.7 |
| cytochrome-c peroxidase | BK654_13830 | Not Available | Negative | 3184636 - 3185703 | 39472.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
