Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | BK654_13535 | Not Available | Negative | 3133829 - 3134935 | 39528.7 |
| abc transporter | BK654_13540 | Not Available | Negative | 3134948 - 3136501 | 55966.8 |
| thymidylate synthase | BK654_13545 | Not Available | Negative | 3137036 - 3137617 | 20923.0 |
| tetr family transcriptional regulator | BK654_13550 | Not Available | Negative | 3137625 - 3138275 | 24288.0 |
| lysr family transcriptional regulator | BK654_13555 | Not Available | Negative | 3138500 - 3139420 | 34095.0 |
| aspartate aminotransferase family protein | BK654_13560 | Not Available | Positive | 3139543 - 3140892 | 48592.2 |
| methylmalonate-semialdehyde dehydrogenase (acylating) | BK654_13565 | Not Available | Positive | 3140965 - 3142458 | 53333.2 |
| biotin--[acetyl-coa-carboxylase] ligase | BK654_13570 | Not Available | Positive | 3142883 - 3143839 | 34899.7 |
| pantothenate kinase | BK654_13575 | Not Available | Positive | 3143829 - 3144578 | 26727.3 |
| hypothetical protein | BK654_13580 | Not Available | Positive | 3144586 - 3145032 | 16305.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
