Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2og-fe(ii) oxygenase | BK654_13485 | Not Available | Negative | 3125950 - 3126915 | 36349.1 |
| bmp family abc transporter substrate-binding protein | BK654_13490 | Not Available | Negative | 3127060 - 3128142 | 39253.8 |
| hypothetical protein | BK654_13495 | Not Available | Positive | 3128187 - 3128402 | 7597.82 |
| calcium:proton antiporter | BK654_13500 | Not Available | Positive | 3128435 - 3129526 | 39031.9 |
| 8-oxoguanine deaminase | BK654_13505 | Not Available | Negative | 3129651 - 3131009 | 49012.9 |
| hypothetical protein | BK654_13510 | Not Available | Positive | 3131008 - 3131211 | 7150.65 |
| short-chain dehydrogenase | BK654_13515 | Not Available | Negative | 3131255 - 3131941 | 24007.7 |
| merr family transcriptional regulator | BK654_13520 | Not Available | Negative | 3131966 - 3132316 | 12944.6 |
| hypothetical protein | BK654_13525 | Not Available | Positive | 3132397 - 3132837 | 16226.0 |
| abc transporter permease | BK654_13530 | Not Available | Negative | 3132903 - 3133829 | 32442.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
