Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(i)-responsive transcriptional regulator | BK654_13435 | Not Available | Negative | 3114942 - 3115355 | 15415.5 |
| copper-translocating p-type atpase | BK654_13440 | Not Available | Negative | 3115352 - 3117745 | 84119.2 |
| hypothetical protein | BK654_13445 | Not Available | Negative | 3117847 - 3118233 | 13797.9 |
| copper resistance protein copz | BK654_13450 | Not Available | Positive | 3118382 - 3118579 | 6869.1 |
| bcr/cfla family drug resistance efflux transporter | BK654_13455 | Not Available | Positive | 3118675 - 3119877 | 41649.1 |
| nadph:quinone reductase | BK654_13460 | Not Available | Negative | 3120303 - 3121316 | 36339.7 |
| lysr family transcriptional regulator | BK654_13465 | Not Available | Positive | 3121430 - 3122359 | 33986.0 |
| transcriptional regulator | BK654_13470 | Not Available | Positive | 3122582 - 3123313 | 26066.7 |
| mfs transporter | BK654_13475 | Not Available | Positive | 3123412 - 3124794 | 50056.9 |
| adenosine deaminase | BK654_13480 | Not Available | Negative | 3124914 - 3125867 | 36033.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
