Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein | BK654_13335 | Not Available | Negative | 3090800 - 3092746 | 69116.3 |
| diguanylate cyclase response regulator | BK654_13340 | Not Available | Negative | 3092799 - 3094469 | 62889.4 |
| hypothetical protein | BK654_13345 | Not Available | Positive | 3094756 - 3095823 | 39266.5 |
| nudix hydrolase | BK654_13350 | Not Available | Positive | 3095827 - 3096384 | 20603.3 |
| translation initiation factor | BK654_13355 | Not Available | Positive | 3096553 - 3096924 | 12815.6 |
| arginine decarboxylase | BK654_13360 | Not Available | Positive | 3097136 - 3099049 | 71040.3 |
| type vi secretion protein | BK654_13365 | Not Available | Positive | 3099318 - 3100637 | 47754.9 |
| hypothetical protein | BK654_13370 | Not Available | Positive | 3100634 - 3101431 | 30104.9 |
| mate family efflux transporter | BK654_13375 | Not Available | Negative | 3101436 - 3102785 | 48363.1 |
| hypothetical protein | BK654_13380 | Not Available | Negative | 3102918 - 3103211 | 10657.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
