Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | BK654_13285 | Not Available | Negative | 3076420 - 3077715 | 45589.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | BK654_13290 | Not Available | Negative | 3077872 - 3079479 | 57553.8 |
| fis family transcriptional regulator | BK654_13295 | Not Available | Negative | 3079563 - 3079883 | 11718.1 |
| trna dihydrouridine synthase dusb | BK654_13300 | Not Available | Negative | 3079880 - 3080887 | 36188.7 |
| hypothetical protein | BK654_13305 | Not Available | Negative | 3081072 - 3082301 | 46106.2 |
| ribosomal protein l11 methyltransferase | BK654_13310 | Not Available | Negative | 3082332 - 3083210 | 31570.4 |
| type iii effector 1 | BK654_13315 | Not Available | Positive | 3083401 - 3087369 | 146418.0 |
| acetyl-coa carboxylase biotin carboxylase subunit | BK654_13320 | Not Available | Negative | 3087451 - 3088812 | 49109.1 |
| acetyl-coa carboxylase, biotin carboxyl carrier protein | BK654_13325 | Not Available | Negative | 3088830 - 3089294 | 16370.7 |
| type ii 3-dehydroquinate dehydratase | BK654_13330 | Not Available | Negative | 3089319 - 3089774 | 16552.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
