Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein uref | BK654_13080 | Not Available | Negative | 3027094 - 3027768 | 25109.8 |
| urease accessory protein uree | BK654_13085 | Not Available | Negative | 3027765 - 3028265 | 18763.2 |
| tetr family transcriptional regulator | BK654_13090 | Not Available | Negative | 3028548 - 3029180 | 23318.5 |
| hypothetical protein | BK654_13095 | Not Available | Negative | 3029338 - 3029757 | 14413.4 |
| hypothetical protein | BK654_13100 | Not Available | Positive | 3030144 - 3032219 | 74329.7 |
| bacterioferritin | BK654_13105 | Not Available | Negative | 3032349 - 3032879 | 19982.4 |
| alpha/beta hydrolase | BK654_13110 | Not Available | Positive | 3033074 - 3033964 | 32159.7 |
| phosphate starvation-inducible protein psif | BK654_13115 | Not Available | Positive | 3034173 - 3034454 | 10090.6 |
| hypothetical protein | BK654_13120 | Not Available | Positive | 3034681 - 3035694 | 36805.0 |
| heat-shock protein | BK654_13125 | Not Available | Negative | 3035829 - 3037103 | 46786.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
