Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | BK654_13030 | Not Available | Positive | 3016004 - 3017287 | 46361.4 |
| branched chain amino acid abc transporter substrate-binding protein | BK654_13035 | Not Available | Positive | 3017659 - 3018792 | 40105.8 |
| branched-chain amino acid abc transporter permease livh | BK654_13040 | Not Available | Positive | 3019017 - 3019931 | 32537.9 |
| branched-chain amino acid abc transporter permease | BK654_13045 | Not Available | Positive | 3019935 - 3021218 | 46074.0 |
| abc transporter atp-binding protein | BK654_13050 | Not Available | Positive | 3021215 - 3022087 | 32059.0 |
| abc transporter atp-binding protein | BK654_13055 | Not Available | Positive | 3022084 - 3022800 | 26088.9 |
| nad(p)-dependent oxidoreductase | BK654_13060 | Not Available | Positive | 3023653 - 3024417 | 27652.1 |
| n-acylglucosamine 2-epimerase | BK654_13065 | Not Available | Negative | 3024548 - 3025681 | 42264.4 |
| protein hupe | BK654_13070 | Not Available | Negative | 3025866 - 3026438 | 18858.5 |
| urease accessory protein ureg | BK654_13075 | Not Available | Negative | 3026470 - 3027084 | 21910.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
