Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin oxidoreductase | BK654_12980 | Not Available | Positive | 3004852 - 3007338 | 92884.2 |
| transglutaminase | BK654_12985 | Not Available | Positive | 3007338 - 3008231 | 33593.1 |
| nudix hydrolase | BK654_12990 | Not Available | Positive | 3008369 - 3008746 | 13799.8 |
| hypothetical protein | BK654_12995 | Not Available | Negative | 3008819 - 3009010 | 6943.98 |
| rossman fold protein, tigr00730 family | BK654_13000 | Not Available | Negative | 3009079 - 3009666 | 20766.0 |
| azurin | BK654_13005 | Not Available | Positive | 3010009 - 3010455 | 15985.3 |
| nad(+) synthase | BK654_13010 | Not Available | Negative | 3010981 - 3011808 | 29779.6 |
| nicotinate phosphoribosyltransferase | BK654_13015 | Not Available | Negative | 3011813 - 3013039 | 47048.8 |
| lysr family transcriptional regulator | BK654_13020 | Not Available | Negative | 3013271 - 3014179 | 34483.3 |
| aldehyde dehydrogenase family protein | BK654_13025 | Not Available | Positive | 3014357 - 3015847 | 53675.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
