Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | BK654_12930 | Not Available | Positive | 2992495 - 2993256 | 27206.2 |
| 30s ribosomal protein s6 | BK654_12935 | Not Available | Positive | 2993562 - 2993990 | 16504.9 |
| 30s ribosomal protein s18 | BK654_12940 | Not Available | Positive | 2994019 - 2994249 | 8917.85 |
| hypothetical protein | BK654_12945 | Not Available | Positive | 2994286 - 2995179 | 32000.8 |
| 50s ribosomal protein l9 | BK654_12950 | Not Available | Positive | 2995198 - 2995644 | 15453.4 |
| replicative dna helicase | BK654_12955 | Not Available | Positive | 2995781 - 2997178 | 51605.3 |
| ygiq family radical sam protein | BK654_12960 | Not Available | Positive | 2997429 - 2999729 | 85782.9 |
| nad synthetase | BK654_12965 | Not Available | Positive | 2999930 - 3000856 | 32500.2 |
| hypothetical protein | BK654_12970 | Not Available | Positive | 3000853 - 3001314 | 16951.6 |
| imp dehydrogenase | BK654_12975 | Not Available | Positive | 3001489 - 3004764 | 123122.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
