Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligoribonuclease | BK654_12830 | Not Available | Positive | 2968586 - 2969128 | 20540.4 |
| hypothetical protein | BK654_12835 | Not Available | Positive | 2969361 - 2969972 | 22482.4 |
| trna epoxyqueuosine(34) reductase queg | BK654_12840 | Not Available | Negative | 2969954 - 2971033 | 40317.3 |
| bifunctional adp-dependent (s)-nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | BK654_12845 | Not Available | Positive | 2971097 - 2972596 | 51477.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | BK654_12850 | Not Available | Positive | 2972584 - 2973054 | 16987.3 |
| n-acetylmuramoyl-l-alanine amidase | BK654_12855 | Not Available | Positive | 2973054 - 2974484 | 50526.6 |
| dna mismatch repair protein mutl | BK654_12860 | Not Available | Positive | 2974481 - 2976400 | 70351.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | BK654_12865 | Not Available | Positive | 2976400 - 2977371 | 35827.2 |
| rna chaperone hfq | BK654_12870 | Not Available | Positive | 2977463 - 2977723 | 9398.38 |
| gtpase hflx | BK654_12875 | Not Available | Positive | 2977736 - 2979037 | 49148.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
