Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribose diphosphatase | BK654_12730 | Not Available | Positive | 2945340 - 2945957 | 22993.3 |
| cytoplasmic protein | BK654_12735 | Not Available | Positive | 2945948 - 2946400 | 17285.0 |
| phosphodiesterase | BK654_12740 | Not Available | Positive | 2946524 - 2947339 | 29820.5 |
| hypothetical protein | BK654_12745 | Not Available | Positive | 2948074 - 2948433 | 12759.0 |
| esterase | BK654_12750 | Not Available | Positive | 2948939 - 2949547 | 22224.3 |
| dna topoisomerase iv subunit b | BK654_12755 | Not Available | Positive | 2949589 - 2951493 | 69403.9 |
| dna topoisomerase iv | BK654_12760 | Not Available | Positive | 2951493 - 2952479 | 35983.6 |
| aspartyl protease | BK654_12765 | Not Available | Positive | 2952476 - 2952997 | 19051.0 |
| dna topoisomerase iv subunit a | BK654_12770 | Not Available | Positive | 2953008 - 2955272 | 83314.0 |
| hypothetical protein | BK654_12775 | Not Available | Positive | 2955452 - 2956159 | 25281.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
