Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atpase | BK654_12680 | Not Available | Negative | 2933130 - 2934095 | 36820.8 |
| aldo/keto reductase | BK654_12685 | Not Available | Negative | 2934130 - 2934942 | 29238.0 |
| fad-dependent oxidoreductase | BK654_12690 | Not Available | Negative | 2934939 - 2936114 | 41745.6 |
| multidrug dmt transporter | BK654_12695 | Not Available | Negative | 2936371 - 2936703 | 11605.0 |
| lysr family transcriptional regulator | BK654_12700 | Not Available | Positive | 2936807 - 2937697 | 33204.0 |
| 3-deoxy-d-manno-octulosonic acid transferase | BK654_12705 | Not Available | Positive | 2937720 - 2939000 | 47110.4 |
| channel protein tolc | BK654_12710 | Not Available | Negative | 2939198 - 2940637 | 52703.4 |
| phosphomethylpyrimidine synthase thic | BK654_12715 | Not Available | Positive | 2941059 - 2942948 | 69630.0 |
| nitrate reductase | BK654_12720 | Not Available | Positive | 2943118 - 2944410 | 45263.5 |
| duf3298 domain-containing protein | BK654_12725 | Not Available | Negative | 2944379 - 2945125 | 27149.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
