Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium/proline symporter | BK654_12530 | Not Available | Positive | 2892291 - 2893775 | 52991.5 |
| hypothetical protein | BK654_12535 | Not Available | Negative | 2893862 - 2894356 | 18634.6 |
| type iv secretion protein rhs | BK654_12540 | Not Available | Positive | 2894625 - 2896682 | 76543.7 |
| hypothetical protein | BK654_12545 | Not Available | Positive | 2896679 - 2897410 | 27070.1 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | BK654_12550 | Not Available | Positive | 2897507 - 2898343 | 31650.3 |
| peptide-methionine (s)-s-oxide reductase | BK654_12555 | Not Available | Negative | 2898521 - 2899168 | 23648.2 |
| diguanylate cyclase | BK654_12560 | Not Available | Negative | 2899253 - 2901946 | 100813.0 |
| phosphodiesterase | BK654_12565 | Not Available | Negative | 2902141 - 2903532 | 52900.6 |
| dihydrolipoyllysine-residue acetyltransferase | BK654_12570 | Not Available | Negative | 2903847 - 2905484 | 55948.6 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | BK654_12575 | Not Available | Negative | 2905496 - 2908141 | 99319.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
