Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK654_12480 | Not Available | Positive | 2874697 - 2875605 | 33903.2 |
| hypothetical protein | BK654_12485 | Not Available | Positive | 2875740 - 2876018 | 9957.09 |
| hypothetical protein | BK654_12490 | Not Available | Negative | 2876239 - 2877702 | 55274.5 |
| potassium transporter kefa | BK654_12495 | Not Available | Negative | 2877739 - 2881101 | 124826.0 |
| k+/h+ antiporter | BK654_12500 | Not Available | Negative | 2881136 - 2882878 | 61346.6 |
| methyl-accepting chemotaxis protein | BK654_12505 | Not Available | Negative | 2883185 - 2884810 | 58555.1 |
| hypothetical protein | BK654_12510 | Not Available | Positive | 2885068 - 2885298 | 8313.78 |
| cell division protein zapa | BK654_12515 | Not Available | Positive | 2885295 - 2885597 | 10873.2 |
| acyl-coa dehydrogenase | BK654_12520 | Not Available | Negative | 2885816 - 2887618 | 66341.1 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | BK654_12525 | Not Available | Negative | 2887875 - 2891828 | 142778.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
