Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | BK654_12430 | Not Available | Positive | 2865518 - 2866879 | 47865.2 |
| polysaccharide deacetylase | BK654_12435 | Not Available | Positive | 2866917 - 2867798 | 33758.1 |
| mfs transporter | BK654_12440 | Not Available | Positive | 2867826 - 2869166 | 47470.3 |
| short-chain dehydrogenase | BK654_12445 | Not Available | Positive | 2869178 - 2869939 | 26548.7 |
| 3-oxoacyl-acp reductase | BK654_12450 | Not Available | Positive | 2870010 - 2870759 | 25981.4 |
| hypothetical protein | BK654_12455 | Not Available | Positive | 2870774 - 2871073 | 10799.0 |
| cobalamin biosynthesis protein cobw | BK654_12460 | Not Available | Positive | 2871070 - 2872074 | 36539.5 |
| signal peptide prediction | BK654_12465 | Not Available | Positive | 2872074 - 2873270 | 44777.9 |
| thiol reductase thioredoxin | BK654_12470 | Not Available | Negative | 2873274 - 2873696 | 15266.7 |
| hydrolase | BK654_12475 | Not Available | Negative | 2873869 - 2874495 | 23034.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
