Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspf | BK654_12225 | Not Available | Positive | 2827304 - 2828512 | 43671.3 |
| type ii secretion system protein gspg | BK654_12230 | Not Available | Positive | 2828516 - 2828962 | 16026.1 |
| type ii secretion system protein gsph | BK654_12235 | Not Available | Positive | 2828965 - 2829432 | 17096.9 |
| type ii secretion system protein gspi | BK654_12240 | Not Available | Positive | 2829425 - 2829811 | 14286.2 |
| type ii secretion system protein gspj | BK654_12245 | Not Available | Positive | 2829804 - 2830337 | 19849.0 |
| type ii secretory protein pulk | BK654_12250 | Not Available | Positive | 2830334 - 2831179 | 30759.7 |
| type ii secretory protein pull | BK654_12255 | Not Available | Positive | 2831179 - 2832282 | 41599.7 |
| type ii secretory protein pulm | BK654_12260 | Not Available | Positive | 2832282 - 2832743 | 16956.3 |
| hypothetical protein | BK654_12265 | Not Available | Negative | 2832761 - 2834038 | 45399.1 |
| lysr family transcriptional regulator | BK654_12270 | Not Available | Positive | 2834158 - 2835051 | 32713.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
